Tantalum in PDB 3enh: Crystal Structure of CGI121/BUD32/KAE1 Complex
Enzymatic activity of Crystal Structure of CGI121/BUD32/KAE1 Complex
All present enzymatic activity of Crystal Structure of CGI121/BUD32/KAE1 Complex:
3.4.24.57;
Protein crystallography data
The structure of Crystal Structure of CGI121/BUD32/KAE1 Complex, PDB code: 3enh
was solved by
D.Neculai,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
94.92 /
3.60
|
Space group
|
P 21 21 21
|
Cell size a, b, c (Å), α, β, γ (°)
|
76.990,
106.910,
209.480,
90.00,
90.00,
90.00
|
R / Rfree (%)
|
27.1 /
32.4
|
Other elements in 3enh:
The structure of Crystal Structure of CGI121/BUD32/KAE1 Complex also contains other interesting chemical elements:
Tantalum Binding Sites:
Tantalum binding site 1 out
of 48 in 3enh
Go back to
Tantalum Binding Sites List in 3enh
Tantalum binding site 1 out
of 48 in the Crystal Structure of CGI121/BUD32/KAE1 Complex
 Mono view
 Stereo pair view
|
A full contact list of Tantalum with other atoms in the Ta binding
site number 1 of Crystal Structure of CGI121/BUD32/KAE1 Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ta1769
b:0.3
occ:0.45
|
TA1
|
A:TBR1769
|
0.0
|
0.3
|
0.5
|
TA3
|
A:TBR1769
|
2.6
|
0.5
|
0.5
|
TA2
|
A:TBR1769
|
2.6
|
0.0
|
0.5
|
TA5
|
A:TBR1769
|
2.6
|
0.4
|
0.5
|
BR1
|
A:TBR1769
|
2.6
|
68.0
|
0.5
|
TA6
|
A:TBR1769
|
2.6
|
0.5
|
0.5
|
BR4
|
A:TBR1769
|
2.6
|
79.5
|
0.5
|
BR3
|
A:TBR1769
|
2.6
|
76.9
|
0.5
|
BR2
|
A:TBR1769
|
2.6
|
84.4
|
0.5
|
TA4
|
A:TBR1769
|
3.7
|
0.1
|
0.5
|
BR6
|
A:TBR1769
|
3.9
|
84.6
|
0.5
|
BRB
|
A:TBR1769
|
4.0
|
1.0
|
0.5
|
BRC
|
A:TBR1769
|
4.0
|
81.7
|
0.5
|
BR5
|
A:TBR1769
|
4.1
|
98.8
|
0.5
|
|
Tantalum binding site 2 out
of 48 in 3enh
Go back to
Tantalum Binding Sites List in 3enh
Tantalum binding site 2 out
of 48 in the Crystal Structure of CGI121/BUD32/KAE1 Complex
 Mono view
 Stereo pair view
|
A full contact list of Tantalum with other atoms in the Ta binding
site number 2 of Crystal Structure of CGI121/BUD32/KAE1 Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ta1769
b:0.0
occ:0.45
|
TA2
|
A:TBR1769
|
0.0
|
0.0
|
0.5
|
TA3
|
A:TBR1769
|
2.6
|
0.5
|
0.5
|
TA4
|
A:TBR1769
|
2.6
|
0.1
|
0.5
|
TA1
|
A:TBR1769
|
2.6
|
0.3
|
0.5
|
BR1
|
A:TBR1769
|
2.6
|
68.0
|
0.5
|
BR6
|
A:TBR1769
|
2.6
|
84.6
|
0.5
|
TA5
|
A:TBR1769
|
2.6
|
0.4
|
0.5
|
BRA
|
A:TBR1769
|
2.6
|
0.5
|
0.5
|
BR5
|
A:TBR1769
|
2.6
|
98.8
|
0.5
|
TA6
|
A:TBR1769
|
3.7
|
0.5
|
0.5
|
BR2
|
A:TBR1769
|
3.9
|
84.4
|
0.5
|
BR3
|
A:TBR1769
|
4.0
|
76.9
|
0.5
|
BR9
|
A:TBR1769
|
4.0
|
0.4
|
0.5
|
BR7
|
A:TBR1769
|
4.1
|
0.1
|
0.5
|
|
Tantalum binding site 3 out
of 48 in 3enh
Go back to
Tantalum Binding Sites List in 3enh
Tantalum binding site 3 out
of 48 in the Crystal Structure of CGI121/BUD32/KAE1 Complex
 Mono view
 Stereo pair view
|
A full contact list of Tantalum with other atoms in the Ta binding
site number 3 of Crystal Structure of CGI121/BUD32/KAE1 Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ta1769
b:0.5
occ:0.45
|
TA3
|
A:TBR1769
|
0.0
|
0.5
|
0.5
|
TA2
|
A:TBR1769
|
2.6
|
0.0
|
0.5
|
TA1
|
A:TBR1769
|
2.6
|
0.3
|
0.5
|
TA4
|
A:TBR1769
|
2.6
|
0.1
|
0.5
|
TA6
|
A:TBR1769
|
2.6
|
0.5
|
0.5
|
BRC
|
A:TBR1769
|
2.6
|
81.7
|
0.5
|
BR5
|
A:TBR1769
|
2.6
|
98.8
|
0.5
|
BR9
|
A:TBR1769
|
2.6
|
0.4
|
0.5
|
BR2
|
A:TBR1769
|
2.6
|
84.4
|
0.5
|
TA5
|
A:TBR1769
|
3.7
|
0.4
|
0.5
|
BR1
|
A:TBR1769
|
3.9
|
68.0
|
0.5
|
BR4
|
A:TBR1769
|
4.0
|
79.5
|
0.5
|
BRA
|
A:TBR1769
|
4.1
|
0.5
|
0.5
|
BR8
|
A:TBR1769
|
4.1
|
0.6
|
0.5
|
|
Tantalum binding site 4 out
of 48 in 3enh
Go back to
Tantalum Binding Sites List in 3enh
Tantalum binding site 4 out
of 48 in the Crystal Structure of CGI121/BUD32/KAE1 Complex
 Mono view
 Stereo pair view
|
A full contact list of Tantalum with other atoms in the Ta binding
site number 4 of Crystal Structure of CGI121/BUD32/KAE1 Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ta1769
b:0.1
occ:0.45
|
TA4
|
A:TBR1769
|
0.0
|
0.1
|
0.5
|
TA2
|
A:TBR1769
|
2.6
|
0.0
|
0.5
|
TA5
|
A:TBR1769
|
2.6
|
0.4
|
0.5
|
TA3
|
A:TBR1769
|
2.6
|
0.5
|
0.5
|
TA6
|
A:TBR1769
|
2.6
|
0.5
|
0.5
|
BR7
|
A:TBR1769
|
2.6
|
0.1
|
0.5
|
BR8
|
A:TBR1769
|
2.6
|
0.6
|
0.5
|
BRA
|
A:TBR1769
|
2.6
|
0.5
|
0.5
|
BR9
|
A:TBR1769
|
2.6
|
0.4
|
0.5
|
TA1
|
A:TBR1769
|
3.7
|
0.3
|
0.5
|
BR5
|
A:TBR1769
|
4.0
|
98.8
|
0.5
|
BRC
|
A:TBR1769
|
4.0
|
81.7
|
0.5
|
BR6
|
A:TBR1769
|
4.1
|
84.6
|
0.5
|
BRB
|
A:TBR1769
|
4.1
|
1.0
|
0.5
|
|
Tantalum binding site 5 out
of 48 in 3enh
Go back to
Tantalum Binding Sites List in 3enh
Tantalum binding site 5 out
of 48 in the Crystal Structure of CGI121/BUD32/KAE1 Complex
 Mono view
 Stereo pair view
|
A full contact list of Tantalum with other atoms in the Ta binding
site number 5 of Crystal Structure of CGI121/BUD32/KAE1 Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ta1769
b:0.4
occ:0.45
|
TA5
|
A:TBR1769
|
0.0
|
0.4
|
0.5
|
TA4
|
A:TBR1769
|
2.6
|
0.1
|
0.5
|
TA6
|
A:TBR1769
|
2.6
|
0.5
|
0.5
|
TA1
|
A:TBR1769
|
2.6
|
0.3
|
0.5
|
TA2
|
A:TBR1769
|
2.6
|
0.0
|
0.5
|
BR3
|
A:TBR1769
|
2.6
|
76.9
|
0.5
|
BR7
|
A:TBR1769
|
2.6
|
0.1
|
0.5
|
BR6
|
A:TBR1769
|
2.6
|
84.6
|
0.5
|
BRB
|
A:TBR1769
|
2.6
|
1.0
|
0.5
|
TA3
|
A:TBR1769
|
3.7
|
0.5
|
0.5
|
BR8
|
A:TBR1769
|
4.0
|
0.6
|
0.5
|
BR4
|
A:TBR1769
|
4.0
|
79.5
|
0.5
|
BRA
|
A:TBR1769
|
4.0
|
0.5
|
0.5
|
BR1
|
A:TBR1769
|
4.1
|
68.0
|
0.5
|
|
Tantalum binding site 6 out
of 48 in 3enh
Go back to
Tantalum Binding Sites List in 3enh
Tantalum binding site 6 out
of 48 in the Crystal Structure of CGI121/BUD32/KAE1 Complex
 Mono view
 Stereo pair view
|
A full contact list of Tantalum with other atoms in the Ta binding
site number 6 of Crystal Structure of CGI121/BUD32/KAE1 Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ta1769
b:0.5
occ:0.45
|
TA6
|
A:TBR1769
|
0.0
|
0.5
|
0.5
|
TA5
|
A:TBR1769
|
2.6
|
0.4
|
0.5
|
TA4
|
A:TBR1769
|
2.6
|
0.1
|
0.5
|
TA3
|
A:TBR1769
|
2.6
|
0.5
|
0.5
|
TA1
|
A:TBR1769
|
2.6
|
0.3
|
0.5
|
BRC
|
A:TBR1769
|
2.6
|
81.7
|
0.5
|
BRB
|
A:TBR1769
|
2.6
|
1.0
|
0.5
|
BR8
|
A:TBR1769
|
2.6
|
0.6
|
0.5
|
BR4
|
A:TBR1769
|
2.6
|
79.5
|
0.5
|
TA2
|
A:TBR1769
|
3.7
|
0.0
|
0.5
|
BR7
|
A:TBR1769
|
4.0
|
0.1
|
0.5
|
BR9
|
A:TBR1769
|
4.0
|
0.4
|
0.5
|
BR3
|
A:TBR1769
|
4.0
|
76.9
|
0.5
|
BR2
|
A:TBR1769
|
4.1
|
84.4
|
0.5
|
|
Tantalum binding site 7 out
of 48 in 3enh
Go back to
Tantalum Binding Sites List in 3enh
Tantalum binding site 7 out
of 48 in the Crystal Structure of CGI121/BUD32/KAE1 Complex
 Mono view
 Stereo pair view
|
A full contact list of Tantalum with other atoms in the Ta binding
site number 7 of Crystal Structure of CGI121/BUD32/KAE1 Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Ta2769
b:84.5
occ:0.15
|
TA1
|
B:TBR2769
|
0.0
|
84.5
|
0.1
|
TA3
|
B:TBR2769
|
2.6
|
81.8
|
0.1
|
TA2
|
B:TBR2769
|
2.6
|
85.4
|
0.1
|
TA6
|
B:TBR2769
|
2.6
|
98.6
|
0.1
|
TA5
|
B:TBR2769
|
2.6
|
86.0
|
0.1
|
BR4
|
B:TBR2769
|
2.6
|
75.9
|
0.1
|
BR1
|
B:TBR2769
|
2.6
|
97.9
|
0.1
|
BR2
|
B:TBR2769
|
2.6
|
88.3
|
0.1
|
BR3
|
B:TBR2769
|
2.6
|
77.3
|
0.1
|
TA4
|
B:TBR2769
|
3.7
|
66.9
|
0.1
|
BR6
|
B:TBR2769
|
4.0
|
81.5
|
0.1
|
BRB
|
B:TBR2769
|
4.0
|
97.1
|
0.1
|
BRC
|
B:TBR2769
|
4.0
|
79.7
|
0.1
|
BR5
|
B:TBR2769
|
4.1
|
72.4
|
0.1
|
|
Tantalum binding site 8 out
of 48 in 3enh
Go back to
Tantalum Binding Sites List in 3enh
Tantalum binding site 8 out
of 48 in the Crystal Structure of CGI121/BUD32/KAE1 Complex
 Mono view
 Stereo pair view
|
A full contact list of Tantalum with other atoms in the Ta binding
site number 8 of Crystal Structure of CGI121/BUD32/KAE1 Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Ta2769
b:85.4
occ:0.15
|
TA2
|
B:TBR2769
|
0.0
|
85.4
|
0.1
|
TA3
|
B:TBR2769
|
2.6
|
81.8
|
0.1
|
TA1
|
B:TBR2769
|
2.6
|
84.5
|
0.1
|
TA4
|
B:TBR2769
|
2.6
|
66.9
|
0.1
|
TA5
|
B:TBR2769
|
2.6
|
86.0
|
0.1
|
BRA
|
B:TBR2769
|
2.6
|
0.8
|
0.2
|
BR5
|
B:TBR2769
|
2.6
|
72.4
|
0.1
|
BR1
|
B:TBR2769
|
2.6
|
97.9
|
0.1
|
BR6
|
B:TBR2769
|
2.6
|
81.5
|
0.1
|
TA6
|
B:TBR2769
|
3.7
|
98.6
|
0.1
|
BR2
|
B:TBR2769
|
4.0
|
88.3
|
0.1
|
BR3
|
B:TBR2769
|
4.0
|
77.3
|
0.1
|
BR9
|
B:TBR2769
|
4.1
|
25.3
|
0.1
|
BR7
|
B:TBR2769
|
4.1
|
77.0
|
0.1
|
|
Tantalum binding site 9 out
of 48 in 3enh
Go back to
Tantalum Binding Sites List in 3enh
Tantalum binding site 9 out
of 48 in the Crystal Structure of CGI121/BUD32/KAE1 Complex
 Mono view
 Stereo pair view
|
A full contact list of Tantalum with other atoms in the Ta binding
site number 9 of Crystal Structure of CGI121/BUD32/KAE1 Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Ta2769
b:81.8
occ:0.15
|
TA3
|
B:TBR2769
|
0.0
|
81.8
|
0.1
|
TA1
|
B:TBR2769
|
2.6
|
84.5
|
0.1
|
TA2
|
B:TBR2769
|
2.6
|
85.4
|
0.1
|
TA4
|
B:TBR2769
|
2.6
|
66.9
|
0.1
|
TA6
|
B:TBR2769
|
2.6
|
98.6
|
0.1
|
BR9
|
B:TBR2769
|
2.6
|
25.3
|
0.1
|
BRC
|
B:TBR2769
|
2.6
|
79.7
|
0.1
|
BR5
|
B:TBR2769
|
2.6
|
72.4
|
0.1
|
BR2
|
B:TBR2769
|
2.6
|
88.3
|
0.1
|
OE2
|
B:GLU476
|
3.2
|
0.0
|
1.0
|
OE1
|
B:GLU476
|
3.4
|
0.3
|
1.0
|
TA5
|
B:TBR2769
|
3.7
|
86.0
|
0.1
|
CD
|
B:GLU476
|
3.7
|
0.2
|
1.0
|
BR1
|
B:TBR2769
|
4.0
|
97.9
|
0.1
|
BR4
|
B:TBR2769
|
4.0
|
75.9
|
0.1
|
BRA
|
B:TBR2769
|
4.0
|
0.8
|
0.2
|
BR8
|
B:TBR2769
|
4.1
|
81.8
|
0.1
|
|
Tantalum binding site 10 out
of 48 in 3enh
Go back to
Tantalum Binding Sites List in 3enh
Tantalum binding site 10 out
of 48 in the Crystal Structure of CGI121/BUD32/KAE1 Complex
 Mono view
 Stereo pair view
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A full contact list of Tantalum with other atoms in the Ta binding
site number 10 of Crystal Structure of CGI121/BUD32/KAE1 Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Ta2769
b:66.9
occ:0.15
|
TA4
|
B:TBR2769
|
0.0
|
66.9
|
0.1
|
TA2
|
B:TBR2769
|
2.6
|
85.4
|
0.1
|
TA3
|
B:TBR2769
|
2.6
|
81.8
|
0.1
|
TA5
|
B:TBR2769
|
2.6
|
86.0
|
0.1
|
TA6
|
B:TBR2769
|
2.6
|
98.6
|
0.1
|
BR8
|
B:TBR2769
|
2.6
|
81.8
|
0.1
|
BR7
|
B:TBR2769
|
2.6
|
77.0
|
0.1
|
BRA
|
B:TBR2769
|
2.6
|
0.8
|
0.2
|
BR9
|
B:TBR2769
|
2.6
|
25.3
|
0.1
|
TA1
|
B:TBR2769
|
3.7
|
84.5
|
0.1
|
BR5
|
B:TBR2769
|
3.9
|
72.4
|
0.1
|
BRC
|
B:TBR2769
|
4.0
|
79.7
|
0.1
|
BR6
|
B:TBR2769
|
4.1
|
81.5
|
0.1
|
BRB
|
B:TBR2769
|
4.1
|
97.1
|
0.1
|
|
Reference:
D.Y.L.Mao,
D.Neculai,
M.Downey,
S.Orlicky,
Y.Z.Haffani,
D.F.Ceccarelli,
J.S.L.Ho,
R.K.Szilard,
W.Zhang,
C.S.Ho,
L.Wan,
C.Fares,
S.Rumpel,
I.Kurinov,
C.H.Arrowsmith,
D.Durocher,
F.Sicheri.
Atomic Structure of the Keops Complex: An Ancient Protein Kinase-Containing Molecular Machine Mol.Cell V. 32 259 2008.
ISSN: ISSN 1097-2765
PubMed: 18951093
DOI: 10.1016/J.MOLCEL.2008.10.002
Page generated: Fri Oct 11 07:52:16 2024
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