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Tantalum in PDB 3enh: Crystal Structure of CGI121/BUD32/KAE1 Complex

Enzymatic activity of Crystal Structure of CGI121/BUD32/KAE1 Complex

All present enzymatic activity of Crystal Structure of CGI121/BUD32/KAE1 Complex:
3.4.24.57;

Protein crystallography data

The structure of Crystal Structure of CGI121/BUD32/KAE1 Complex, PDB code: 3enh was solved by D.Neculai, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 94.92 / 3.60
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 76.990, 106.910, 209.480, 90.00, 90.00, 90.00
R / Rfree (%) 27.1 / 32.4

Other elements in 3enh:

The structure of Crystal Structure of CGI121/BUD32/KAE1 Complex also contains other interesting chemical elements:

Bromine (Br) 96 atoms

Tantalum Binding Sites:

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 20; Page 3, Binding sites: 21 - 30; Page 4, Binding sites: 31 - 40; Page 5, Binding sites: 41 - 48;

Binding sites:

The binding sites of Tantalum atom in the Crystal Structure of CGI121/BUD32/KAE1 Complex (pdb code 3enh). This binding sites where shown within 5.0 Angstroms radius around Tantalum atom.
In total 48 binding sites of Tantalum where determined in the Crystal Structure of CGI121/BUD32/KAE1 Complex, PDB code: 3enh:
Jump to Tantalum binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Tantalum binding site 1 out of 48 in 3enh

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Tantalum binding site 1 out of 48 in the Crystal Structure of CGI121/BUD32/KAE1 Complex


Mono view


Stereo pair view

A full contact list of Tantalum with other atoms in the Ta binding site number 1 of Crystal Structure of CGI121/BUD32/KAE1 Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ta1769

b:0.3
occ:0.45
TA1 A:TBR1769 0.0 0.3 0.5
TA3 A:TBR1769 2.6 0.5 0.5
TA2 A:TBR1769 2.6 0.0 0.5
TA5 A:TBR1769 2.6 0.4 0.5
BR1 A:TBR1769 2.6 68.0 0.5
TA6 A:TBR1769 2.6 0.5 0.5
BR4 A:TBR1769 2.6 79.5 0.5
BR3 A:TBR1769 2.6 76.9 0.5
BR2 A:TBR1769 2.6 84.4 0.5
TA4 A:TBR1769 3.7 0.1 0.5
BR6 A:TBR1769 3.9 84.6 0.5
BRB A:TBR1769 4.0 1.0 0.5
BRC A:TBR1769 4.0 81.7 0.5
BR5 A:TBR1769 4.1 98.8 0.5

Tantalum binding site 2 out of 48 in 3enh

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Tantalum binding site 2 out of 48 in the Crystal Structure of CGI121/BUD32/KAE1 Complex


Mono view


Stereo pair view

A full contact list of Tantalum with other atoms in the Ta binding site number 2 of Crystal Structure of CGI121/BUD32/KAE1 Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ta1769

b:0.0
occ:0.45
TA2 A:TBR1769 0.0 0.0 0.5
TA3 A:TBR1769 2.6 0.5 0.5
TA4 A:TBR1769 2.6 0.1 0.5
TA1 A:TBR1769 2.6 0.3 0.5
BR1 A:TBR1769 2.6 68.0 0.5
BR6 A:TBR1769 2.6 84.6 0.5
TA5 A:TBR1769 2.6 0.4 0.5
BRA A:TBR1769 2.6 0.5 0.5
BR5 A:TBR1769 2.6 98.8 0.5
TA6 A:TBR1769 3.7 0.5 0.5
BR2 A:TBR1769 3.9 84.4 0.5
BR3 A:TBR1769 4.0 76.9 0.5
BR9 A:TBR1769 4.0 0.4 0.5
BR7 A:TBR1769 4.1 0.1 0.5

Tantalum binding site 3 out of 48 in 3enh

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Tantalum binding site 3 out of 48 in the Crystal Structure of CGI121/BUD32/KAE1 Complex


Mono view


Stereo pair view

A full contact list of Tantalum with other atoms in the Ta binding site number 3 of Crystal Structure of CGI121/BUD32/KAE1 Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ta1769

b:0.5
occ:0.45
TA3 A:TBR1769 0.0 0.5 0.5
TA2 A:TBR1769 2.6 0.0 0.5
TA1 A:TBR1769 2.6 0.3 0.5
TA4 A:TBR1769 2.6 0.1 0.5
TA6 A:TBR1769 2.6 0.5 0.5
BRC A:TBR1769 2.6 81.7 0.5
BR5 A:TBR1769 2.6 98.8 0.5
BR9 A:TBR1769 2.6 0.4 0.5
BR2 A:TBR1769 2.6 84.4 0.5
TA5 A:TBR1769 3.7 0.4 0.5
BR1 A:TBR1769 3.9 68.0 0.5
BR4 A:TBR1769 4.0 79.5 0.5
BRA A:TBR1769 4.1 0.5 0.5
BR8 A:TBR1769 4.1 0.6 0.5

Tantalum binding site 4 out of 48 in 3enh

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Tantalum binding site 4 out of 48 in the Crystal Structure of CGI121/BUD32/KAE1 Complex


Mono view


Stereo pair view

A full contact list of Tantalum with other atoms in the Ta binding site number 4 of Crystal Structure of CGI121/BUD32/KAE1 Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ta1769

b:0.1
occ:0.45
TA4 A:TBR1769 0.0 0.1 0.5
TA2 A:TBR1769 2.6 0.0 0.5
TA5 A:TBR1769 2.6 0.4 0.5
TA3 A:TBR1769 2.6 0.5 0.5
TA6 A:TBR1769 2.6 0.5 0.5
BR7 A:TBR1769 2.6 0.1 0.5
BR8 A:TBR1769 2.6 0.6 0.5
BRA A:TBR1769 2.6 0.5 0.5
BR9 A:TBR1769 2.6 0.4 0.5
TA1 A:TBR1769 3.7 0.3 0.5
BR5 A:TBR1769 4.0 98.8 0.5
BRC A:TBR1769 4.0 81.7 0.5
BR6 A:TBR1769 4.1 84.6 0.5
BRB A:TBR1769 4.1 1.0 0.5

Tantalum binding site 5 out of 48 in 3enh

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Tantalum binding site 5 out of 48 in the Crystal Structure of CGI121/BUD32/KAE1 Complex


Mono view


Stereo pair view

A full contact list of Tantalum with other atoms in the Ta binding site number 5 of Crystal Structure of CGI121/BUD32/KAE1 Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ta1769

b:0.4
occ:0.45
TA5 A:TBR1769 0.0 0.4 0.5
TA4 A:TBR1769 2.6 0.1 0.5
TA6 A:TBR1769 2.6 0.5 0.5
TA1 A:TBR1769 2.6 0.3 0.5
TA2 A:TBR1769 2.6 0.0 0.5
BR3 A:TBR1769 2.6 76.9 0.5
BR7 A:TBR1769 2.6 0.1 0.5
BR6 A:TBR1769 2.6 84.6 0.5
BRB A:TBR1769 2.6 1.0 0.5
TA3 A:TBR1769 3.7 0.5 0.5
BR8 A:TBR1769 4.0 0.6 0.5
BR4 A:TBR1769 4.0 79.5 0.5
BRA A:TBR1769 4.0 0.5 0.5
BR1 A:TBR1769 4.1 68.0 0.5

Tantalum binding site 6 out of 48 in 3enh

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Tantalum binding site 6 out of 48 in the Crystal Structure of CGI121/BUD32/KAE1 Complex


Mono view


Stereo pair view

A full contact list of Tantalum with other atoms in the Ta binding site number 6 of Crystal Structure of CGI121/BUD32/KAE1 Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ta1769

b:0.5
occ:0.45
TA6 A:TBR1769 0.0 0.5 0.5
TA5 A:TBR1769 2.6 0.4 0.5
TA4 A:TBR1769 2.6 0.1 0.5
TA3 A:TBR1769 2.6 0.5 0.5
TA1 A:TBR1769 2.6 0.3 0.5
BRC A:TBR1769 2.6 81.7 0.5
BRB A:TBR1769 2.6 1.0 0.5
BR8 A:TBR1769 2.6 0.6 0.5
BR4 A:TBR1769 2.6 79.5 0.5
TA2 A:TBR1769 3.7 0.0 0.5
BR7 A:TBR1769 4.0 0.1 0.5
BR9 A:TBR1769 4.0 0.4 0.5
BR3 A:TBR1769 4.0 76.9 0.5
BR2 A:TBR1769 4.1 84.4 0.5

Tantalum binding site 7 out of 48 in 3enh

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Tantalum binding site 7 out of 48 in the Crystal Structure of CGI121/BUD32/KAE1 Complex


Mono view


Stereo pair view

A full contact list of Tantalum with other atoms in the Ta binding site number 7 of Crystal Structure of CGI121/BUD32/KAE1 Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ta2769

b:84.5
occ:0.15
TA1 B:TBR2769 0.0 84.5 0.1
TA3 B:TBR2769 2.6 81.8 0.1
TA2 B:TBR2769 2.6 85.4 0.1
TA6 B:TBR2769 2.6 98.6 0.1
TA5 B:TBR2769 2.6 86.0 0.1
BR4 B:TBR2769 2.6 75.9 0.1
BR1 B:TBR2769 2.6 97.9 0.1
BR2 B:TBR2769 2.6 88.3 0.1
BR3 B:TBR2769 2.6 77.3 0.1
TA4 B:TBR2769 3.7 66.9 0.1
BR6 B:TBR2769 4.0 81.5 0.1
BRB B:TBR2769 4.0 97.1 0.1
BRC B:TBR2769 4.0 79.7 0.1
BR5 B:TBR2769 4.1 72.4 0.1

Tantalum binding site 8 out of 48 in 3enh

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Tantalum binding site 8 out of 48 in the Crystal Structure of CGI121/BUD32/KAE1 Complex


Mono view


Stereo pair view

A full contact list of Tantalum with other atoms in the Ta binding site number 8 of Crystal Structure of CGI121/BUD32/KAE1 Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ta2769

b:85.4
occ:0.15
TA2 B:TBR2769 0.0 85.4 0.1
TA3 B:TBR2769 2.6 81.8 0.1
TA1 B:TBR2769 2.6 84.5 0.1
TA4 B:TBR2769 2.6 66.9 0.1
TA5 B:TBR2769 2.6 86.0 0.1
BRA B:TBR2769 2.6 0.8 0.2
BR5 B:TBR2769 2.6 72.4 0.1
BR1 B:TBR2769 2.6 97.9 0.1
BR6 B:TBR2769 2.6 81.5 0.1
TA6 B:TBR2769 3.7 98.6 0.1
BR2 B:TBR2769 4.0 88.3 0.1
BR3 B:TBR2769 4.0 77.3 0.1
BR9 B:TBR2769 4.1 25.3 0.1
BR7 B:TBR2769 4.1 77.0 0.1

Tantalum binding site 9 out of 48 in 3enh

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Tantalum binding site 9 out of 48 in the Crystal Structure of CGI121/BUD32/KAE1 Complex


Mono view


Stereo pair view

A full contact list of Tantalum with other atoms in the Ta binding site number 9 of Crystal Structure of CGI121/BUD32/KAE1 Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ta2769

b:81.8
occ:0.15
TA3 B:TBR2769 0.0 81.8 0.1
TA1 B:TBR2769 2.6 84.5 0.1
TA2 B:TBR2769 2.6 85.4 0.1
TA4 B:TBR2769 2.6 66.9 0.1
TA6 B:TBR2769 2.6 98.6 0.1
BR9 B:TBR2769 2.6 25.3 0.1
BRC B:TBR2769 2.6 79.7 0.1
BR5 B:TBR2769 2.6 72.4 0.1
BR2 B:TBR2769 2.6 88.3 0.1
OE2 B:GLU476 3.2 0.0 1.0
OE1 B:GLU476 3.4 0.3 1.0
TA5 B:TBR2769 3.7 86.0 0.1
CD B:GLU476 3.7 0.2 1.0
BR1 B:TBR2769 4.0 97.9 0.1
BR4 B:TBR2769 4.0 75.9 0.1
BRA B:TBR2769 4.0 0.8 0.2
BR8 B:TBR2769 4.1 81.8 0.1

Tantalum binding site 10 out of 48 in 3enh

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Tantalum binding site 10 out of 48 in the Crystal Structure of CGI121/BUD32/KAE1 Complex


Mono view


Stereo pair view

A full contact list of Tantalum with other atoms in the Ta binding site number 10 of Crystal Structure of CGI121/BUD32/KAE1 Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ta2769

b:66.9
occ:0.15
TA4 B:TBR2769 0.0 66.9 0.1
TA2 B:TBR2769 2.6 85.4 0.1
TA3 B:TBR2769 2.6 81.8 0.1
TA5 B:TBR2769 2.6 86.0 0.1
TA6 B:TBR2769 2.6 98.6 0.1
BR8 B:TBR2769 2.6 81.8 0.1
BR7 B:TBR2769 2.6 77.0 0.1
BRA B:TBR2769 2.6 0.8 0.2
BR9 B:TBR2769 2.6 25.3 0.1
TA1 B:TBR2769 3.7 84.5 0.1
BR5 B:TBR2769 3.9 72.4 0.1
BRC B:TBR2769 4.0 79.7 0.1
BR6 B:TBR2769 4.1 81.5 0.1
BRB B:TBR2769 4.1 97.1 0.1

Reference:

D.Y.L.Mao, D.Neculai, M.Downey, S.Orlicky, Y.Z.Haffani, D.F.Ceccarelli, J.S.L.Ho, R.K.Szilard, W.Zhang, C.S.Ho, L.Wan, C.Fares, S.Rumpel, I.Kurinov, C.H.Arrowsmith, D.Durocher, F.Sicheri. Atomic Structure of the Keops Complex: An Ancient Protein Kinase-Containing Molecular Machine Mol.Cell V. 32 259 2008.
ISSN: ISSN 1097-2765
PubMed: 18951093
DOI: 10.1016/J.MOLCEL.2008.10.002
Page generated: Wed Dec 16 02:26:08 2020

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