Atomistry » Thallium » PDB 1dd4-7u1b » 3en9
Atomistry »
  Thallium »
    PDB 1dd4-7u1b »
      3en9 »

Tantalum in PDB 3en9: Structure of the Methanococcus Jannaschii KAE1-BUD32 Fusion Protein

Enzymatic activity of Structure of the Methanococcus Jannaschii KAE1-BUD32 Fusion Protein

All present enzymatic activity of Structure of the Methanococcus Jannaschii KAE1-BUD32 Fusion Protein:
3.4.24.57;

Protein crystallography data

The structure of Structure of the Methanococcus Jannaschii KAE1-BUD32 Fusion Protein, PDB code: 3en9 was solved by D.Neculai, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 65.29 / 2.67
Space group P 41 2 2
Cell size a, b, c (Å), α, β, γ (°) 148.730, 148.730, 136.420, 90.00, 90.00, 90.00
R / Rfree (%) 20.2 / 26.4

Other elements in 3en9:

The structure of Structure of the Methanococcus Jannaschii KAE1-BUD32 Fusion Protein also contains other interesting chemical elements:

Bromine (Br) 19 atoms
Magnesium (Mg) 2 atoms

Tantalum Binding Sites:

The binding sites of Tantalum atom in the Structure of the Methanococcus Jannaschii KAE1-BUD32 Fusion Protein (pdb code 3en9). This binding sites where shown within 5.0 Angstroms radius around Tantalum atom.
In total 9 binding sites of Tantalum where determined in the Structure of the Methanococcus Jannaschii KAE1-BUD32 Fusion Protein, PDB code: 3en9:
Jump to Tantalum binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9;

Tantalum binding site 1 out of 9 in 3en9

Go back to Tantalum Binding Sites List in 3en9
Tantalum binding site 1 out of 9 in the Structure of the Methanococcus Jannaschii KAE1-BUD32 Fusion Protein


Mono view


Stereo pair view

A full contact list of Tantalum with other atoms in the Ta binding site number 1 of Structure of the Methanococcus Jannaschii KAE1-BUD32 Fusion Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ta601

b:67.2
occ:0.70
 TA1 B:TBR601 0.0 67.2 0.7
OE1 B:GLU23 2.3 76.9 1.0
BR1 B:TBR601 2.6 61.8 0.7
BR3 B:TBR601 2.6 70.3 0.7
BR4 B:TBR601 2.6 69.5 0.7
BR2 B:TBR601 2.6 75.8 0.7
TA6 B:TBR601 2.6 65.9 0.7
TA3 B:TBR601 2.7 65.5 0.7
TA5 B:TBR601 2.7 60.6 0.7
TA2 B:TBR601 2.7 59.7 0.7
CD B:GLU23 3.5 72.9 1.0
TA4 B:TBR601 3.8 62.4 0.7
BRB B:TBR601 4.0 59.1 0.7
BR5 B:TBR601 4.1 64.7 0.7
BRC B:TBR601 4.1 67.7 0.7
BR6 B:TBR601 4.1 57.3 0.7
CG B:GLU23 4.4 68.8 1.0
OE2 B:GLU23 4.4 71.1 1.0
CB B:GLU23 4.6 67.3 1.0

Tantalum binding site 2 out of 9 in 3en9

Go back to Tantalum Binding Sites List in 3en9
Tantalum binding site 2 out of 9 in the Structure of the Methanococcus Jannaschii KAE1-BUD32 Fusion Protein


Mono view


Stereo pair view

A full contact list of Tantalum with other atoms in the Ta binding site number 2 of Structure of the Methanococcus Jannaschii KAE1-BUD32 Fusion Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ta601

b:59.7
occ:0.70
 TA2 B:TBR601 0.0 59.7 0.7
BR5 B:TBR601 2.6 64.7 0.7
BR6 B:TBR601 2.6 57.3 0.7
TA3 B:TBR601 2.6 65.5 0.7
BR1 B:TBR601 2.7 61.8 0.7
BRA B:TBR601 2.7 68.9 0.7
TA4 B:TBR601 2.7 62.4 0.7
TA1 B:TBR601 2.7 67.2 0.7
TA5 B:TBR601 2.7 60.6 0.7
TA6 B:TBR601 3.8 65.9 0.7
BR2 B:TBR601 4.0 75.8 0.7
BR3 B:TBR601 4.1 70.3 0.7
BR9 B:TBR601 4.1 67.9 0.7
BR7 B:TBR601 4.1 60.4 0.7
OE1 B:GLU23 4.5 76.9 1.0

Tantalum binding site 3 out of 9 in 3en9

Go back to Tantalum Binding Sites List in 3en9
Tantalum binding site 3 out of 9 in the Structure of the Methanococcus Jannaschii KAE1-BUD32 Fusion Protein


Mono view


Stereo pair view

A full contact list of Tantalum with other atoms in the Ta binding site number 3 of Structure of the Methanococcus Jannaschii KAE1-BUD32 Fusion Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ta601

b:65.5
occ:0.70
 TA3 B:TBR601 0.0 65.5 0.7
BR5 B:TBR601 2.6 64.7 0.7
TA2 B:TBR601 2.6 59.7 0.7
BRC B:TBR601 2.6 67.7 0.7
TA4 B:TBR601 2.7 62.4 0.7
TA6 B:TBR601 2.7 65.9 0.7
BR2 B:TBR601 2.7 75.8 0.7
TA1 B:TBR601 2.7 67.2 0.7
BR9 B:TBR601 2.7 67.9 0.7
TA5 B:TBR601 3.8 60.6 0.7
BR1 B:TBR601 4.0 61.8 0.7
BR4 B:TBR601 4.1 69.5 0.7
BR8 B:TBR601 4.1 72.0 0.7
BRA B:TBR601 4.1 68.9 0.7
OE1 B:GLU23 4.4 76.9 1.0

Tantalum binding site 4 out of 9 in 3en9

Go back to Tantalum Binding Sites List in 3en9
Tantalum binding site 4 out of 9 in the Structure of the Methanococcus Jannaschii KAE1-BUD32 Fusion Protein


Mono view


Stereo pair view

A full contact list of Tantalum with other atoms in the Ta binding site number 4 of Structure of the Methanococcus Jannaschii KAE1-BUD32 Fusion Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ta601

b:62.4
occ:0.70
 TA4 B:TBR601 0.0 62.4 0.7
BR8 B:TBR601 2.6 72.0 0.7
BR7 B:TBR601 2.6 60.4 0.7
BRA B:TBR601 2.6 68.9 0.7
BR9 B:TBR601 2.6 67.9 0.7
TA3 B:TBR601 2.7 65.5 0.7
TA2 B:TBR601 2.7 59.7 0.7
TA6 B:TBR601 2.7 65.9 0.7
TA5 B:TBR601 2.7 60.6 0.7
TA1 B:TBR601 3.8 67.2 0.7
BRC B:TBR601 4.0 67.7 0.7
BR6 B:TBR601 4.0 57.3 0.7
BRB B:TBR601 4.1 59.1 0.7
BR5 B:TBR601 4.1 64.7 0.7

Tantalum binding site 5 out of 9 in 3en9

Go back to Tantalum Binding Sites List in 3en9
Tantalum binding site 5 out of 9 in the Structure of the Methanococcus Jannaschii KAE1-BUD32 Fusion Protein


Mono view


Stereo pair view

A full contact list of Tantalum with other atoms in the Ta binding site number 5 of Structure of the Methanococcus Jannaschii KAE1-BUD32 Fusion Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ta601

b:60.6
occ:0.70
 TA5 B:TBR601 0.0 60.6 0.7
BRB B:TBR601 2.6 59.1 0.7
BR6 B:TBR601 2.6 57.3 0.7
BR3 B:TBR601 2.6 70.3 0.7
BR7 B:TBR601 2.7 60.4 0.7
TA1 B:TBR601 2.7 67.2 0.7
TA4 B:TBR601 2.7 62.4 0.7
TA6 B:TBR601 2.7 65.9 0.7
TA2 B:TBR601 2.7 59.7 0.7
TA3 B:TBR601 3.8 65.5 0.7
BR8 B:TBR601 4.1 72.0 0.7
BR1 B:TBR601 4.1 61.8 0.7
BRA B:TBR601 4.1 68.9 0.7
BR4 B:TBR601 4.1 69.5 0.7
OD2 B:ASP21 4.4 74.9 1.0
OE1 B:GLU23 4.7 76.9 1.0
CG B:PRO0 5.0 80.2 1.0

Tantalum binding site 6 out of 9 in 3en9

Go back to Tantalum Binding Sites List in 3en9
Tantalum binding site 6 out of 9 in the Structure of the Methanococcus Jannaschii KAE1-BUD32 Fusion Protein


Mono view


Stereo pair view

A full contact list of Tantalum with other atoms in the Ta binding site number 6 of Structure of the Methanococcus Jannaschii KAE1-BUD32 Fusion Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ta601

b:65.9
occ:0.70
 TA6 B:TBR601 0.0 65.9 0.7
BRB B:TBR601 2.6 59.1 0.7
BRC B:TBR601 2.6 67.7 0.7
BR8 B:TBR601 2.6 72.0 0.7
TA1 B:TBR601 2.6 67.2 0.7
TA3 B:TBR601 2.7 65.5 0.7
BR4 B:TBR601 2.7 69.5 0.7
TA4 B:TBR601 2.7 62.4 0.7
TA5 B:TBR601 2.7 60.6 0.7
TA2 B:TBR601 3.8 59.7 0.7
BR9 B:TBR601 4.1 67.9 0.7
BR2 B:TBR601 4.1 75.8 0.7
BR7 B:TBR601 4.1 60.4 0.7
BR3 B:TBR601 4.1 70.3 0.7
OE1 B:GLU23 4.6 76.9 1.0

Tantalum binding site 7 out of 9 in 3en9

Go back to Tantalum Binding Sites List in 3en9
Tantalum binding site 7 out of 9 in the Structure of the Methanococcus Jannaschii KAE1-BUD32 Fusion Protein


Mono view


Stereo pair view

A full contact list of Tantalum with other atoms in the Ta binding site number 7 of Structure of the Methanococcus Jannaschii KAE1-BUD32 Fusion Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ta601

b:0.3
occ:0.30
 TA1 A:TBR601 0.0 0.3 0.3
BR2 A:TBR601 2.6 0.8 0.3
BR4 A:TBR601 2.6 0.4 0.3
BR1 A:TBR601 2.6 0.3 0.2
BR3 A:TBR601 2.6 0.1 0.3
TA3 A:TBR601 2.9 0.3 0.3
TA6 A:TBR601 2.9 0.5 0.3
BRC A:TBR601 4.2 0.3 0.3
BRB A:TBR601 4.3 91.2 0.3
OE1 A:GLU518 4.7 0.6 1.0
CD A:GLU518 5.0 0.4 1.0

Tantalum binding site 8 out of 9 in 3en9

Go back to Tantalum Binding Sites List in 3en9
Tantalum binding site 8 out of 9 in the Structure of the Methanococcus Jannaschii KAE1-BUD32 Fusion Protein


Mono view


Stereo pair view

A full contact list of Tantalum with other atoms in the Ta binding site number 8 of Structure of the Methanococcus Jannaschii KAE1-BUD32 Fusion Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ta601

b:0.3
occ:0.30
 TA3 A:TBR601 0.0 0.3 0.3
BR2 A:TBR601 2.6 0.8 0.3
BRC A:TBR601 2.6 0.3 0.3
TA6 A:TBR601 2.9 0.5 0.3
TA1 A:TBR601 2.9 0.3 0.3
BR1 A:TBR601 3.3 0.3 0.2
BR4 A:TBR601 4.2 0.4 0.3
BR8 A:TBR601 4.8 0.4 0.2

Tantalum binding site 9 out of 9 in 3en9

Go back to Tantalum Binding Sites List in 3en9
Tantalum binding site 9 out of 9 in the Structure of the Methanococcus Jannaschii KAE1-BUD32 Fusion Protein


Mono view


Stereo pair view

A full contact list of Tantalum with other atoms in the Ta binding site number 9 of Structure of the Methanococcus Jannaschii KAE1-BUD32 Fusion Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ta601

b:0.5
occ:0.30
 TA6 A:TBR601 0.0 0.5 0.3
BR8 A:TBR601 2.6 0.4 0.2
BRB A:TBR601 2.6 91.2 0.3
BRC A:TBR601 2.6 0.3 0.3
BR4 A:TBR601 2.6 0.4 0.3
TA3 A:TBR601 2.9 0.3 0.3
TA1 A:TBR601 2.9 0.3 0.3
BR3 A:TBR601 4.2 0.1 0.3
BR2 A:TBR601 4.3 0.8 0.3
BR1 A:TBR601 5.0 0.3 0.2

Reference:

D.Y.Mao, D.Neculai, M.Downey, S.Orlicky, Y.Z.Haffani, D.F.Ceccarelli, J.S.Ho, R.K.Szilard, W.Zhang, C.S.Ho, L.Wan, C.Fares, S.Rumpel, I.Kurinov, C.H.Arrowsmith, D.Durocher, F.Sicheri. Atomic Structure of the Keops Complex: An Ancient Protein Kinase-Containing Molecular Machine. Mol.Cell V. 32 259 2008.
ISSN: ISSN 1097-2765
PubMed: 18951093
DOI: 10.1016/J.MOLCEL.2008.10.002
Page generated: Wed Dec 16 02:26:09 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy