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    PDB 1dd4-3enh
      1dd4
      1hkx
      1z7l
      2bvl
      3c0v
      3en9
      3enh

Tantalum in the structure of Crystal Structure Of the Catalytic Domain of Toxin B From Clostridium Difficile in Complex With Udp, Glc and Manganese Ion (pdb 2bvl)






The binding sites of Tantalum atom in the structure of Crystal Structure Of the Catalytic Domain of Toxin B From Clostridium Difficile in Complex With Udp, Glc and Manganese Ion (pdb code 2bvl). This binding sites where shown with 5.0 Angstroms radius around Tantalum atom.
The 2bvl structure was solved by D.J.REINERT, T.JANK, K.AKTORIES, G.E.SCHULZ, with X-Ray Crystallography technique, brief refinement statistics is given in the table below:
Resolution (A)30.0-2.2
Space groupP212121
a (A)63.010
b (A)95.797
c (A)112.915
alpha (°)90.00
beta (°)90.00
gamma (°)90.00
Rfactor (%)19.7
Rfree (%)24.4


Tantalum Binding Sites:

Tantalum binding site 1 out of 24 in 2bvl


Tantalum binding site 1 out of 24 in 2bvl
Click to enlarge
stereopicture of Tantalum binding site 1 out of 24 in 2bvl
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Tantalum in the PDB 2bvl. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Tantalum atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Tbr1548,

conact list:


AtomAtomDistance (A)
TaTA1 A:Tbr15480.00
TaTA4 A:Tbr15484.05
TaBR1 A:Tbr15482.64
TaBR6 A:Tbr15484.16
TaBR3 A:Tbr15482.66
TaBR4 A:Tbr15482.67
TaTA2 A:Tbr15482.84
TaTA6 A:Tbr15482.88
TaBRC A:Tbr15484.14
TaTA5 A:Tbr15482.88
TaBR5 A:Tbr15484.27
TaBR2 A:Tbr15482.64
TaBRB A:Tbr15484.21
TaTA3 A:Tbr15482.79

interactive model:


Tantalum binding site 2 out of 24 in 2bvl


Tantalum binding site 2 out of 24 in 2bvl
Click to enlarge
stereopicture of Tantalum binding site 2 out of 24 in 2bvl
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 2 of Tantalum in the PDB 2bvl. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Tantalum atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Asn36, A: Tbr1548,

conact list:


AtomAtomDistance (A)
TaND2 A:Asn364.67
TaTA1 A:Tbr15482.88
TaTA4 A:Tbr15482.88
TaBR8 A:Tbr15484.15
TaBR1 A:Tbr15484.26
TaBR6 A:Tbr15482.66
TaBR3 A:Tbr15482.64
TaBRA A:Tbr15484.21
TaBR4 A:Tbr15484.16
TaTA2 A:Tbr15482.92
TaTA6 A:Tbr15482.86
TaBR7 A:Tbr15482.65
TaTA5 A:Tbr15480.00
TaBRB A:Tbr15482.65
TaTA3 A:Tbr15484.03

interactive model:


Tantalum binding site 3 out of 24 in 2bvl


Tantalum binding site 3 out of 24 in 2bvl
Click to enlarge
stereopicture of Tantalum binding site 3 out of 24 in 2bvl
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 3 of Tantalum in the PDB 2bvl. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Tantalum atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Tbr1548,

conact list:


AtomAtomDistance (A)
TaTA1 A:Tbr15482.88
TaTA4 A:Tbr15482.93
TaBR8 A:Tbr15482.66
TaBR9 A:Tbr15484.18
TaBR3 A:Tbr15484.18
TaBR4 A:Tbr15482.66
TaTA2 A:Tbr15484.09
TaTA6 A:Tbr15480.00
TaBR7 A:Tbr15484.15
TaBRC A:Tbr15482.65
TaTA5 A:Tbr15482.86
TaBR2 A:Tbr15484.28
TaBRB A:Tbr15482.66
TaTA3 A:Tbr15482.92

interactive model:


Tantalum binding site 4 out of 24 in 2bvl


Tantalum binding site 4 out of 24 in 2bvl
Click to enlarge
stereopicture of Tantalum binding site 4 out of 24 in 2bvl
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 4 of Tantalum in the PDB 2bvl. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Tantalum atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Glu33, A: Tbr1548,

conact list:


AtomAtomDistance (A)
TaOE2 A:Glu334.34
TaCG A:Glu334.73
TaTA1 A:Tbr15482.84
TaTA4 A:Tbr15482.86
TaBR1 A:Tbr15482.66
TaBR6 A:Tbr15482.66
TaBR9 A:Tbr15484.17
TaBR3 A:Tbr15484.17
TaBRA A:Tbr15482.66
TaTA2 A:Tbr15480.00
TaTA6 A:Tbr15484.09
TaBR7 A:Tbr15484.25
TaTA5 A:Tbr15482.92
TaBR5 A:Tbr15482.66
TaBR2 A:Tbr15484.13
TaTA3 A:Tbr15482.78

interactive model:


Tantalum binding site 5 out of 24 in 2bvl


Tantalum binding site 5 out of 24 in 2bvl
Click to enlarge
stereopicture of Tantalum binding site 5 out of 24 in 2bvl
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 5 of Tantalum in the PDB 2bvl. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Tantalum atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Tbr1548,

conact list:


AtomAtomDistance (A)
TaTA1 A:Tbr15482.79
TaTA4 A:Tbr15482.88
TaBR8 A:Tbr15484.24
TaBR1 A:Tbr15484.09
TaBR9 A:Tbr15482.66
TaBRA A:Tbr15484.19
TaBR4 A:Tbr15484.22
TaTA2 A:Tbr15482.78
TaTA6 A:Tbr15482.92
TaBRC A:Tbr15482.67
TaTA5 A:Tbr15484.03
TaBR5 A:Tbr15482.66
TaBR2 A:Tbr15482.65
TaTA3 A:Tbr15480.00

interactive model:


Tantalum binding site 6 out of 24 in 2bvl


Tantalum binding site 6 out of 24 in 2bvl
Click to enlarge
stereopicture of Tantalum binding site 6 out of 24 in 2bvl
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 6 of Tantalum in the PDB 2bvl. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Tantalum atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Arg6, A: Asp29, A: Tbr1548,

conact list:


AtomAtomDistance (A)
TaNH1 A:Arg64.74
TaOD1 A:Asp294.69
TaTA1 A:Tbr15484.05
TaTA4 A:Tbr15480.00
TaBR8 A:Tbr15482.66
TaBR6 A:Tbr15484.16
TaBR9 A:Tbr15482.65
TaBRA A:Tbr15482.65
TaTA2 A:Tbr15482.86
TaTA6 A:Tbr15482.93
TaBR7 A:Tbr15482.64
TaBRC A:Tbr15484.18
TaTA5 A:Tbr15482.88
TaBR5 A:Tbr15484.15
TaBRB A:Tbr15484.28
TaTA3 A:Tbr15482.88

interactive model:


Tantalum binding site 7 out of 24 in 2bvl


Tantalum binding site 7 out of 24 in 2bvl
Click to enlarge
stereopicture of Tantalum binding site 7 out of 24 in 2bvl
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 7 of Tantalum in the PDB 2bvl. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Tantalum atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Ser379, A: Tbr1549,

conact list:


AtomAtomDistance (A)
TaCB A:Ser3794.78
TaOG A:Ser3793.45
TaTA1 A:Tbr15490.00
TaTA4 A:Tbr15494.01
TaBR1 A:Tbr15492.66
TaBR6 A:Tbr15494.08
TaBR3 A:Tbr15492.64
TaBR4 A:Tbr15492.65
TaTA2 A:Tbr15492.83
TaTA6 A:Tbr15492.84
TaBRC A:Tbr15494.03
TaTA5 A:Tbr15492.82
TaBR5 A:Tbr15494.15
TaBR2 A:Tbr15492.65
TaBRB A:Tbr15494.34
TaTA3 A:Tbr15492.76

interactive model:


Tantalum binding site 8 out of 24 in 2bvl


Tantalum binding site 8 out of 24 in 2bvl
Click to enlarge
stereopicture of Tantalum binding site 8 out of 24 in 2bvl
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 8 of Tantalum in the PDB 2bvl. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Tantalum atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Asn378, A: Lys380, A: Tbr1549,

conact list:


AtomAtomDistance (A)
TaND2 A:Asn3784.66
TaCG A:Lys3804.55
TaTA1 A:Tbr15492.82
TaTA4 A:Tbr15492.82
TaBR8 A:Tbr15494.15
TaBR1 A:Tbr15494.26
TaBR6 A:Tbr15492.66
TaBR3 A:Tbr15492.66
TaBRA A:Tbr15494.23
TaBR4 A:Tbr15494.08
TaTA2 A:Tbr15492.91
TaTA6 A:Tbr15492.71
TaBR7 A:Tbr15492.66
TaTA5 A:Tbr15490.00
TaBRB A:Tbr15492.65
TaTA3 A:Tbr15493.96

interactive model:


Tantalum binding site 9 out of 24 in 2bvl


Tantalum binding site 9 out of 24 in 2bvl
Click to enlarge
stereopicture of Tantalum binding site 9 out of 24 in 2bvl
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 9 of Tantalum in the PDB 2bvl. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Tantalum atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Asn378, A: Glu515, A: Tbr1549, A: Hoh2084, A: Hoh2227, A: Hoh2327,

conact list:


AtomAtomDistance (A)
TaND2 A:Asn3784.34
TaOE2 A:Glu5154.15
TaTA1 A:Tbr15492.84
TaTA4 A:Tbr15492.88
TaBR8 A:Tbr15492.66
TaBR9 A:Tbr15494.25
TaBR3 A:Tbr15494.06
TaBR4 A:Tbr15492.66
TaTA2 A:Tbr15494.07
TaTA6 A:Tbr15490.00
TaBR7 A:Tbr15494.14
TaBRC A:Tbr15492.64
TaTA5 A:Tbr15492.71
TaBR2 A:Tbr15494.26
TaBRB A:Tbr15492.66
TaTA3 A:Tbr15492.94
TaO A:Hoh20844.37
TaO A:Hoh22274.23
TaO A:Hoh23274.55

interactive model:


Tantalum binding site 10 out of 24 in 2bvl


Tantalum binding site 10 out of 24 in 2bvl
Click to enlarge
stereopicture of Tantalum binding site 10 out of 24 in 2bvl
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 10 of Tantalum in the PDB 2bvl. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Tantalum atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Tbr1549,

conact list:


AtomAtomDistance (A)
TaTA1 A:Tbr15492.83
TaTA4 A:Tbr15492.87
TaBR1 A:Tbr15492.66
TaBR6 A:Tbr15492.66
TaBR9 A:Tbr15494.14
TaBR3 A:Tbr15494.23
TaBRA A:Tbr15492.66
TaTA2 A:Tbr15490.00
TaTA6 A:Tbr15494.07
TaBR7 A:Tbr15494.22
TaTA5 A:Tbr15492.91
TaBR5 A:Tbr15492.66
TaBR2 A:Tbr15494.18
TaTA3 A:Tbr15492.79

interactive model:


Tantalum binding site 11 out of 24 in 2bvl


Tantalum binding site 11 out of 24 in 2bvl
Click to enlarge
stereopicture of Tantalum binding site 11 out of 24 in 2bvl
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 11 of Tantalum in the PDB 2bvl. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Tantalum atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Met516, A: Tbr1549,

conact list:


AtomAtomDistance (A)
TaSD A:Met5164.47
TaTA1 A:Tbr15492.76
TaTA4 A:Tbr15492.87
TaBR8 A:Tbr15494.17
TaBR1 A:Tbr15494.09
TaBR9 A:Tbr15492.66
TaBRA A:Tbr15494.16
TaBR4 A:Tbr15494.21
TaTA2 A:Tbr15492.79
TaTA6 A:Tbr15492.94
TaBRC A:Tbr15492.67
TaTA5 A:Tbr15493.96
TaBR5 A:Tbr15492.66
TaBR2 A:Tbr15492.65
TaTA3 A:Tbr15490.00

interactive model:


Tantalum binding site 12 out of 24 in 2bvl


Tantalum binding site 12 out of 24 in 2bvl
Click to enlarge
stereopicture of Tantalum binding site 12 out of 24 in 2bvl
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 12 of Tantalum in the PDB 2bvl. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Tantalum atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Tbr1549, A: Hoh2352, A: Hoh2354,

conact list:


AtomAtomDistance (A)
TaTA1 A:Tbr15494.01
TaTA4 A:Tbr15490.00
TaBR8 A:Tbr15492.66
TaBR6 A:Tbr15494.17
TaBR9 A:Tbr15492.66
TaBRA A:Tbr15492.66
TaTA2 A:Tbr15492.87
TaTA6 A:Tbr15492.88
TaBR7 A:Tbr15492.65
TaBRC A:Tbr15494.18
TaTA5 A:Tbr15492.82
TaBR5 A:Tbr15494.27
TaBRB A:Tbr15494.21
TaTA3 A:Tbr15492.87
TaO A:Hoh23524.85
TaO A:Hoh23544.97

interactive model:


Tantalum binding site 13 out of 24 in 2bvl


Tantalum binding site 13 out of 24 in 2bvl
Click to enlarge
stereopicture of Tantalum binding site 13 out of 24 in 2bvl
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 13 of Tantalum in the PDB 2bvl. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Tantalum atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Asp497, A: Tbr1550,

conact list:


AtomAtomDistance (A)
TaCB A:Asp4974.88
TaOD2 A:Asp4974.38
TaOD1 A:Asp4972.57
TaCG A:Asp4973.77
TaCA A:Asp4974.96
TaTA1 A:Tbr15500.00
TaTA4 A:Tbr15504.01
TaBR1 A:Tbr15502.65
TaBR6 A:Tbr15504.13
TaBR3 A:Tbr15502.66
TaBR4 A:Tbr15502.66
TaTA2 A:Tbr15502.74
TaTA6 A:Tbr15502.82
TaBRC A:Tbr15504.22
TaTA5 A:Tbr15502.75
TaBR5 A:Tbr15504.11
TaBR2 A:Tbr15502.65
TaBRB A:Tbr15504.20
TaTA3 A:Tbr15502.88

interactive model:


Tantalum binding site 14 out of 24 in 2bvl


Tantalum binding site 14 out of 24 in 2bvl
Click to enlarge
stereopicture of Tantalum binding site 14 out of 24 in 2bvl
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 14 of Tantalum in the PDB 2bvl. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Tantalum atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Val80, A: Thr81, A: Tbr1550,

conact list:


AtomAtomDistance (A)
TaCG1 A:Val804.66
TaOG1 A:Thr814.62
TaTA1 A:Tbr15502.75
TaTA4 A:Tbr15502.92
TaBR8 A:Tbr15504.29
TaBR1 A:Tbr15504.13
TaBR6 A:Tbr15502.65
TaBR3 A:Tbr15502.66
TaBRA A:Tbr15504.13
TaBR4 A:Tbr15504.04
TaTA2 A:Tbr15502.74
TaTA6 A:Tbr15502.81
TaBR7 A:Tbr15502.68
TaTA5 A:Tbr15500.00
TaBRB A:Tbr15502.66
TaTA3 A:Tbr15503.94

interactive model:


Tantalum binding site 15 out of 24 in 2bvl


Tantalum binding site 15 out of 24 in 2bvl
Click to enlarge
stereopicture of Tantalum binding site 15 out of 24 in 2bvl
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 15 of Tantalum in the PDB 2bvl. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Tantalum atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Asp497, A: Tbr1550,

conact list:


AtomAtomDistance (A)
TaOD1 A:Asp4974.97
TaTA1 A:Tbr15502.82
TaTA4 A:Tbr15502.74
TaBR8 A:Tbr15502.66
TaBR9 A:Tbr15504.21
TaBR3 A:Tbr15504.26
TaBR4 A:Tbr15502.67
TaTA2 A:Tbr15503.87
TaTA6 A:Tbr15500.00
TaBR7 A:Tbr15504.08
TaBRC A:Tbr15502.66
TaTA5 A:Tbr15502.81
TaBR2 A:Tbr15504.04
TaBRB A:Tbr15502.66
TaTA3 A:Tbr15502.70

interactive model:


Tantalum binding site 16 out of 24 in 2bvl


Tantalum binding site 16 out of 24 in 2bvl
Click to enlarge
stereopicture of Tantalum binding site 16 out of 24 in 2bvl
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 16 of Tantalum in the PDB 2bvl. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Tantalum atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Asp497, A: Tbr1550,

conact list:


AtomAtomDistance (A)
TaOD1 A:Asp4974.88
TaTA1 A:Tbr15502.74
TaTA4 A:Tbr15502.85
TaBR1 A:Tbr15502.66
TaBR6 A:Tbr15502.67
TaBR9 A:Tbr15504.24
TaBR3 A:Tbr15504.11
TaBRA A:Tbr15502.66
TaTA2 A:Tbr15500.00
TaTA6 A:Tbr15503.87
TaBR7 A:Tbr15504.09
TaTA5 A:Tbr15502.74
TaBR5 A:Tbr15502.66
TaBR2 A:Tbr15504.10
TaTA3 A:Tbr15502.80

interactive model:


Tantalum binding site 17 out of 24 in 2bvl


Tantalum binding site 17 out of 24 in 2bvl
Click to enlarge
stereopicture of Tantalum binding site 17 out of 24 in 2bvl
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 17 of Tantalum in the PDB 2bvl. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Tantalum atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Asp497, A: Tbr1550,

conact list:


AtomAtomDistance (A)
TaOD1 A:Asp4974.78
TaTA1 A:Tbr15502.88
TaTA4 A:Tbr15502.69
TaBR8 A:Tbr15504.07
TaBR1 A:Tbr15504.26
TaBR9 A:Tbr15502.67
TaBRA A:Tbr15504.09
TaBR4 A:Tbr15504.21
TaTA2 A:Tbr15502.80
TaTA6 A:Tbr15502.70
TaBRC A:Tbr15502.65
TaTA5 A:Tbr15503.94
TaBR5 A:Tbr15502.66
TaBR2 A:Tbr15502.66
TaTA3 A:Tbr15500.00

interactive model:


Tantalum binding site 18 out of 24 in 2bvl


Tantalum binding site 18 out of 24 in 2bvl
Click to enlarge
stereopicture of Tantalum binding site 18 out of 24 in 2bvl
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 18 of Tantalum in the PDB 2bvl. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Tantalum atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Tbr1550, A: Hoh2052,

conact list:


AtomAtomDistance (A)
TaTA1 A:Tbr15504.01
TaTA4 A:Tbr15500.00
TaBR8 A:Tbr15502.66
TaBR6 A:Tbr15504.30
TaBR9 A:Tbr15502.65
TaBRA A:Tbr15502.65
TaTA2 A:Tbr15502.85
TaTA6 A:Tbr15502.74
TaBR7 A:Tbr15502.66
TaBRC A:Tbr15504.12
TaTA5 A:Tbr15502.92
TaBR5 A:Tbr15504.14
TaBRB A:Tbr15504.09
TaTA3 A:Tbr15502.69
TaO A:Hoh20524.78

interactive model:


Tantalum binding site 19 out of 24 in 2bvl


Tantalum binding site 19 out of 24 in 2bvl
Click to enlarge
stereopicture of Tantalum binding site 19 out of 24 in 2bvl
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 19 of Tantalum in the PDB 2bvl. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Tantalum atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Asn425, A: Tbr1551,

conact list:


AtomAtomDistance (A)
TaOD1 A:Asn4254.02
TaCG A:Asn4254.87
TaTA1 A:Tbr15510.00
TaTA4 A:Tbr15513.94
TaBR1 A:Tbr15512.65
TaBR6 A:Tbr15514.24
TaBR3 A:Tbr15512.66
TaBR4 A:Tbr15512.67
TaTA2 A:Tbr15512.78
TaTA6 A:Tbr15512.70
TaBRC A:Tbr15514.01
TaTA5 A:Tbr15512.82
TaBR5 A:Tbr15514.13
TaBR2 A:Tbr15512.65
TaBRB A:Tbr15514.13
TaTA3 A:Tbr15512.77

interactive model:


Tantalum binding site 20 out of 24 in 2bvl


Tantalum binding site 20 out of 24 in 2bvl
Click to enlarge
stereopicture of Tantalum binding site 20 out of 24 in 2bvl
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 20 of Tantalum in the PDB 2bvl. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Tantalum atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Thr428, A: Ile432, A: Tbr1551, A: Hoh2277,

conact list:


AtomAtomDistance (A)
TaCG2 A:Thr4284.66
TaCD1 A:Ile4324.93
TaTA1 A:Tbr15512.82
TaTA4 A:Tbr15512.76
TaBR8 A:Tbr15514.24
TaBR1 A:Tbr15514.15
TaBR6 A:Tbr15512.66
TaBR3 A:Tbr15512.65
TaBRA A:Tbr15514.04
TaBR4 A:Tbr15514.17
TaTA2 A:Tbr15512.74
TaTA6 A:Tbr15512.83
TaBR7 A:Tbr15512.66
TaTA5 A:Tbr15510.00
TaBRB A:Tbr15512.65
TaTA3 A:Tbr15513.92
TaO A:Hoh22774.38

interactive model:


Tantalum binding site 21 out of 24 in 2bvl


Tantalum binding site 21 out of 24 in 2bvl
Click to enlarge
stereopicture of Tantalum binding site 21 out of 24 in 2bvl
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 21 of Tantalum in the PDB 2bvl. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Tantalum atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Asn429, A: Tbr1551,

conact list:


AtomAtomDistance (A)
TaOD1 A:Asn4293.74
TaCG A:Asn4294.81
TaTA1 A:Tbr15512.70
TaTA4 A:Tbr15512.76
TaBR8 A:Tbr15512.67
TaBR9 A:Tbr15514.12
TaBR3 A:Tbr15514.15
TaBR4 A:Tbr15512.64
TaTA2 A:Tbr15513.93
TaTA6 A:Tbr15510.00
TaBR7 A:Tbr15514.20
TaBRC A:Tbr15512.66
TaTA5 A:Tbr15512.83
TaBR2 A:Tbr15514.08
TaBRB A:Tbr15512.66
TaTA3 A:Tbr15512.76

interactive model:


Tantalum binding site 22 out of 24 in 2bvl


Tantalum binding site 22 out of 24 in 2bvl
Click to enlarge
stereopicture of Tantalum binding site 22 out of 24 in 2bvl
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 22 of Tantalum in the PDB 2bvl. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Tantalum atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Arg455, A: Tbr1551, A: Hoh2280,

conact list:


AtomAtomDistance (A)
TaNH1 A:Arg4554.70
TaTA1 A:Tbr15512.78
TaTA4 A:Tbr15512.89
TaBR1 A:Tbr15512.66
TaBR6 A:Tbr15512.66
TaBR9 A:Tbr15514.26
TaBR3 A:Tbr15514.02
TaBRA A:Tbr15512.66
TaTA2 A:Tbr15510.00
TaTA6 A:Tbr15513.93
TaBR7 A:Tbr15514.22
TaTA5 A:Tbr15512.74
TaBR5 A:Tbr15512.66
TaBR2 A:Tbr15514.15
TaTA3 A:Tbr15512.79
TaO A:Hoh22803.25

interactive model:


Tantalum binding site 23 out of 24 in 2bvl


Tantalum binding site 23 out of 24 in 2bvl
Click to enlarge
stereopicture of Tantalum binding site 23 out of 24 in 2bvl
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 23 of Tantalum in the PDB 2bvl. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Tantalum atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Tbr1551,

conact list:


AtomAtomDistance (A)
TaTA1 A:Tbr15512.77
TaTA4 A:Tbr15512.77
TaBR8 A:Tbr15514.11
TaBR1 A:Tbr15514.14
TaBR9 A:Tbr15512.66
TaBRA A:Tbr15514.05
TaBR4 A:Tbr15514.29
TaTA2 A:Tbr15512.79
TaTA6 A:Tbr15512.76
TaBRC A:Tbr15512.66
TaTA5 A:Tbr15513.92
TaBR5 A:Tbr15512.66
TaBR2 A:Tbr15512.65
TaTA3 A:Tbr15510.00

interactive model:


Tantalum binding site 24 out of 24 in 2bvl


Tantalum binding site 24 out of 24 in 2bvl
Click to enlarge
stereopicture of Tantalum binding site 24 out of 24 in 2bvl
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 24 of Tantalum in the PDB 2bvl. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Tantalum atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Tbr1551,

conact list:


AtomAtomDistance (A)
TaTA1 A:Tbr15513.94
TaTA4 A:Tbr15510.00
TaBR8 A:Tbr15512.66
TaBR6 A:Tbr15514.24
TaBR9 A:Tbr15512.66
TaBRA A:Tbr15512.66
TaTA2 A:Tbr15512.89
TaTA6 A:Tbr15512.76
TaBR7 A:Tbr15512.66
TaBRC A:Tbr15514.20
TaTA5 A:Tbr15512.76
TaBR5 A:Tbr15514.25
TaBRB A:Tbr15514.01
TaTA3 A:Tbr15512.77

interactive model:




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